| JP-1844 | Shin-Osaka Brick Building Helipad | Osaka | Heliport |
| JP-1860 | Shin-Osaka Hankyu Building Helipad | Osaka | Heliport |
| JP-2865 | Shin-Osaka Hanwa Building Helipad | Osaka | Heliport |
| JP-1720 | Shin-Osaka Trust Tower Helipad | Osaka | Heliport |
| JP-1465 | Shin-Sakurabashi Building | Osaka | Heliport |
| JP-0548 | Shin-Yokohama Square Heliport | Yokohama | Heliport |
| JP-2500 | Shin-Yurigaoka General Hospital Heliport | Kawasaki | Heliport |
| JP-0433 | Shinagawa Central Heliport | Shinagawa, Tokyo | Heliport |
| JP-0915 | Shinagawa East One Tower Helipad | Minato, Tokyo | Heliport |
| JP-0919 | Shinagawa Front Building Helipad | Minato, Tokyo | Heliport |
| JP-0913 | Shinagawa Grand Central Tower Helipad | Minato, Tokyo | Heliport |
| JP-0918 | Shinagawa HEART Helipad | Minato, Tokyo | Heliport |
| JP-0909 | Shinagawa Intercity A Helipad | Minato, Tokyo | Heliport |
| JP-0911 | Shinagawa Intercity B Helipad | Minato, Tokyo | Heliport |
| JP-0916 | Shinagawa Intercity Tower Helipad | Minato, Tokyo | Heliport |
| JP-3264 | Shinagawa Prince Hotel Annex Tower Helipad | Minato, Tokyo | Heliport |
| JP-3263 | Shinagawa Prince Hotel Main Tower Helipad | Minato, Tokyo | Heliport |
| JP-2486 | Shinagawa Seaside East Tower Helipad | Shinagawa, Tokyo | Heliport |
| JP-2693 | Shinagawa Seaside Park Tower Helipad | Shinagawa, Tokyo | Heliport |
| JP-2490 | Shinagawa Seaside South Tower Helipad | Shinagawa, Tokyo | Heliport |
| JP-2694 | Shinagawa Seaside TS Tower Helipad | Shinagawa, Tokyo | Heliport |
| JP-2488 | Shinagawa Seaside View Tower 1 Helipad | Shinagawa, Tokyo | Heliport |
| JP-2695 | Shinagawa Seaside West Tower Helipad | Shinagawa, Tokyo | Heliport |
| JP-0933 | Shinagawa Season Terrace Helipad | Minato, Tokyo | Heliport |
| JP-0910 | Shinagawa Tower Face Helipad | Minato, Tokyo | Heliport |
| JP-0908 | Shinagawa V Tower Helipad | Minato, Tokyo | Heliport |
| JP-0437 | Shinanogawa Right Bank Helipad | Nagaoka | Heliport |
| JP-2731 | Shingu Heliport | Shikokuchuo | Heliport |
| JP-3173 | Shinjo District Kumotani Heliport | Mihama | Heliport |
| JP-1156 | Shinjo Heliport | Taketomi | Heliport |
| JP-1345 | Shinjo Heliport | Shinjo | Heliport |
| JP-3109 | Shinjo Medevac Heliport | Katsuragi | Heliport |
| JP-0160 | Shinjuku First West Building Helipad | Shinjuku, Tokyo | Heliport |
| JP-0166 | Shinjuku Front Tower Helipad | Shinjuku, Tokyo | Heliport |
| JP-0167 | Shinjuku Grand Tower Helipad | Shinjuku, Tokyo | Heliport |
| JP-0163 | Shinjuku Green Tower Building Helipad | Shinjuku, Tokyo | Heliport |
| JP-3070 | Shinjuku Monolith Building Helipad | Shinjuku, Tokyo | Heliport |
| JP-0162 | Shinjuku Oak Tower Helipad | Shinjuku, Tokyo | Heliport |
| JP-0164 | Shinjuku Square Tower Helipad | Shinjuku, Tokyo | Heliport |
| JP-0168 | Shinjuku Toho Building Helipad | Shinjuku, Tokyo | Heliport |
| JP-0161 | Shinjuku i-LAND Tower Helipad | Shinjuku, Tokyo | Heliport |
| JP-0622 | Shinkawadori District Disaster Prevention Station Heliport | Kazo | Heliport |
| JP-0883 | Shinmaiko Seaplane Base | Chita | Closed |
| JP-2323 | Shinnihon Helicopter Numata Heliport | Numata | Heliport |
| JP-3021 | Shinnoshobo Emergency Heliport | Anan | Heliport |
| JP-0526 | Shinonome Airfield | Koto, Tokyo | Closed |
| JP-1977 | Shinonome Residences Helipad | Koto, Tokyo | Heliport |
| JP-2186 | Shinsaibashi Opa Helipad | Osaka | Heliport |
| JP-0256 | Shinsaiwaibashi Building Heliport | Chiyoda, Tokyo | Heliport |
| JP-0472 | Shinshinotsu Gliderport | Iwamizawa | Small airport |
